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Jobs at Flagship Pioneering, Inc.
85 open roles read nightly from companies’ own hiring pages. Each one links to the original ad.
61–80 of 85 jobs
Senior Manager, Visual Design
2 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Manager$128K – $176K a yearDesignFlagship Pioneering is seeking a highly creative Senior Manager, Visual Design to elevate how we communicate our science, innovation model, and impact through compelling visual storytelling.
(Senior) Scientist, Optical Technologies
2 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Senior$100K – $180K a yearScience & researchDesign and execute experiments using advanced optical and vibrational spectroscopy measurement techniques to characterize biological systems.; Own a portfolio of internal and external experiments, coordinating work across CROs, university core facilities, academic…
Strategic Transactions Counsel, APEX
3 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Senior$176K – $346K a yearLegal & complianceFlagship Pioneering is seeking a highly motivated Strategic Transactions Counsel to join our growing Transactions team. Flagship undertakes dozens of complex and value-oriented transactions at any given time, including complex joint ventures and partnerships, licensing and…
Senior Associate, Origination
3 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Senior$155K – $190K a yearAs a Senior Associate at Flagship Pioneering, you will ideate, research, and refine novel venture hypotheses, validate key underlying unknowns of biology or technology, and transition pressure-tested ideas into building a NewCo around the science. You will help drive every…
Scientist, Computational Sensing
3 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Mid level$115K – $165K a yearScience & researchWe are looking for a Bioinformatics Scientist to join our Computational Team to help build the analytical foundation that connects nanopore measurements to biological understanding. This role sits at the intersection of biology, physics, signal processing, and machine learning…
Principal Scientist, Machine Learning
3 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Lead / staff$208K – $286K a yearData & AIWe are seeking a Principal Scientist (Embedded ML/Computational) to lead AI/ML and computational projects that accelerate pharmaceutical R&D across the preclinical, translational, and clinical continuum, working closely with Pioneering Medicines (PM) and across Flagship’s…
Senior Automation Engineer, Platform Biology
3 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Senior$108K – $170.7K a yearEngineeringVesalius is seeking a highly motivated Automation Engineer to help scale our automated biology platform. This early-career role sits at the intersection of biology, robotics, software, and data systems, with a focus on programming, data handling, systems integration, and…
Principal / Senior Software Engineer
3 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Lead / staff$108K – $209K a yearEngineeringWe are seeking an experienced, creative, and talented Principal / Senior Software Engineer. The ideal candidate will have a strong background in software and product development, with the ability to lead projects and communicate effectively across teams and with ML researchers.
Senior Director, Strategy and Operations
3 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Director$220K – $270K a yearOperationsAs a Flagship Labs Sr. Director, Strategy and Operations for 2 Origination Teams, you will be responsible for facilitating, coordinating and managing the execution of company creation activities with the highest degree of entrepreneurialism, creativity, agility and…
Flagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Senior$115K – $205K a yearScience & researchPioneering Intelligence (PI) is building AI systems that accelerate translational decision making. This forward-deployed role bridges the gap from capability to impact by leveraging PI technologies to take on translational challenges across Flagship’s therapeutic portfolio,…
Principal / Senior Principal Scientist, DMPK
4 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Lead / staff$179K – $236K a yearScience & researchLead DMPK strategy and oversee bioanalytical work across nonclinical and clinical programs, including PK, biomarker, and translational PD readouts; Oversee development, qualification, and validation of nonclinical and clinical bioanalytical assays (GLP/GCP-compliant as…
Flagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Lead / staff$216K – $297K a yearData & AIPioneering Intelligence is seeking a Lead for Flagship's ambitious efforts to build polyintelligent AI systems that unify human scientific expertise, machine intelligence, and nature’s biological signals into multi-modal, multi-scale reasoning engines for biology.
(Senior) Scientist, Machine Learning
4 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Senior$180K – $258.5K a yearData & AIExpedition is seeking a motivated and innovative (Senior) Scientist, Machine Learning to join our team. In this role, you will play a critical role in developing, evaluating, and applying machine learning approaches that connect Expedition’s proprietary chemoproteomics data…
Principal Software Engineer - Agentic Platform
4 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Lead / staff$188K – $257.5K a yearEngineeringThe Pioneering Intelligence group at Flagship Pioneering is building intelligent software systems that integrate agentic AI with scientific reasoning to accelerate discovery and decision-making. At the center of this effort is a new autonomous research platform. It supports…
Vice President, Human Resources
4 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Executive$270K – $320K a yearPeople & HRThe VP, HRBP for Flagship Labs will be a key driver of the people strategy for the origination team members across our Pioneering Business Units in Flagship Labs (approximately 110 individuals). This role will have a dual reporting relationship to HR, and COO, Flagship Labs. In…
Flagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Lead / staff$208K – $286K a yearData & AIWe are seeking a Principal Scientist (Embedded ML/Computational) to lead multiple AI/ML or computational projects across early stage ventures, as a part of Flagship’s company origination process. You will define and deliver pragmatic AI strategies, oversee method and platform…
Associate Director Finance
5 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Director$148K – $203.5K a yearFinanceThe Associate Director, Finance, will be a key member of the Flagship Pioneering finance team, responsible for supporting financial planning, reporting, accounting, forecasting, and operational finance activities across primarily the Pioneering Medicine’s (PM) portfolio of…
Contracts Attorney
5 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
$138K – $236.5K a yearLegal & complianceWe are seeking a Contracts Attorney to join our in-house legal team and support the Flagship ecosystem. This individual will draft, negotiate, and manage a high volume and variety of contracts across Flagship's portfolio companies, including agreements related to research and…
Flagship Pioneering, Inc. · Boulder, Colorado, United States +1
Senior$127K – $205.9K a yearData & AIWe are seeking a Senior Machine Learning Scientist, Climate and Hydrology to lead the scientific direction and machine learning development for hydrology-aware climate modeling within our broader environmental modeling platform.
VP, Program Management & Business Operations
6 months agoFlagship Pioneering, Inc. · Cambridge, Massachusetts, United States
Executive$250K – $330K a yearOperationsAlltrna is seeking a talented and highly motivated VP, Director Program Management and Business Operations, reporting to the President & CFO. The successful candidate is a proven leader with extensive experience in leading research and early drug development program teams from…
Updated 06 Nov 2026 09:37 UTC from the OptiTalent job library.